Genetic Diversity among Grapevine (Vitis Vinifera L.) Cultivars of Tartous Province (Syria) using Microsatellite Markers

International Journal of Agriculture & Environmental Science
© 2018 by SSRG - IJAES Journal
Volume 5 Issue 6
Year of Publication : 2018
Authors : Rabab Dauob, Georges Makhoul, Hafez Mahfoud
pdf
How to Cite?

Rabab Dauob, Georges Makhoul, Hafez Mahfoud, "Genetic Diversity among Grapevine (Vitis Vinifera L.) Cultivars of Tartous Province (Syria) using Microsatellite Markers," SSRG International Journal of Agriculture & Environmental Science, vol. 5,  no. 6, pp. 54-8, 2018. Crossref, https://doi.org/10.14445/23942568/IJAES-V5I6P109

Abstract:

Genetic variation among 32 grapevine (Vitis vinifera L.) accessions belongs to 23 cultivars from Tartous province were analysed using 10 SSR primers (Simple Sequence Repeat). The ten SSR loci generated (44) alleles, of which (32) were polymorphic (72.72%). The number of SSR markers per primer pair ranged from 3 (VVMD8 and SCU10VV) to 7 (VVS5) with an average of 4.4 alleles/primers. Two loci (VVS1 and VVMD8) gave 100% polymorphic alleles. Cluster analysis separated the investigated cultivars in six major groups with a genetic variance of 0.29. High level of genetic diversity obtained in the collection may be attributed due to continuous seed propagation by birds, natural hybridization between local and introduced cultivars and human selection. Levels of polymorphism detected within the studied accessions proved to be sufficiently genetically diverse and therefore these accessions would be useful in grapevine breeding programs.

Keywords:

Grapevine, Genetic diversity, SSR technique, cluster analysis

References:

[1] M. G. Mullins, A. Bouquet, and L. E. Williams, “Biology of grapevine,” Cambridge University Press, Cambridge, pp. 251, 1992.
[2] C. Arnold, A. Schnitzler, A. Douard, R. Peter, and F. Gillet, “Is there a future for wild grapevine (Vitis vinifera subsp silvestris) in the Rhine Valley?,” Biodiversity and Conservation, vol. 14 (6), pp. 1507-1523, 2005.
[3] R. Arroyo‐García, L. Ruiz‐García, L. Bolling, R. Ocete, M. A. López, and C. Arnold, “Multiple origins of cultivated grapevine (Vitis vinifera L. ssp. sativa) based on chloroplast DNA polymorphisms,” Molecular Ecology, vol. 15, pp. 3707–3714, 2006.
[4] M. H. K. Nazif, M. I. Atef, I. Mohamed, and A. H. Abdul-Fattah, “Grapes (cultivation, care, and production). El maaref Establishment Alexandria,” pp. 455, 1990.
[5] F. Abdul Rahman, B. M. Muhammad, and F. Hamed, “Molecular characterization of some Vitis vinifera L. Grape varieties Localized and involved in Suweida Governorate using SSR Technology,” Journal of Al-Baath university, vol. 39(16), 2017.
[6] A. S. Mason, SSR Genotyping. In: J. Batley, editor, “Plant Genotyping,” Springer, New York, pp. 77–89, 2015.
[7] M. R. Thomas, and N. S. Scott, “Microsatellite repeats in grapevine reveal DNA polymorphisms when analysed as sequence tagged sites (STSs),” Theor. Appl. Genet, vol. 86, pp. 985–990, 1993.
[8] L. E. Martinez, P. F. Cavagnaro, R. W. Masuelli, and M. Zuniga, “SSR-based assessment of genetic diversity in South American Vitis vinifera varieties,” Plant Science, vol. 170, pp. 1036–1044, 2006.
[9] M. R. Schuck, F. M. Moreira, M. P. Guerra, J. A. Voltolini, M. S. Grando, and A. L. da Silva, “Molecular characterization of grapevine from Santa Catarina, Brazil, using microsatellite markers,” Pesq. agropec. Bras, vol. 44(5), pp. 79-84, 2009.
[10] H. Doulati-Baneh, S. A. Mohammadi, and M. Labra, M, “Genitic structure and diversity analysis in Vitis vinifera L. cultivars from Iran using SSR markers,” Scientia Horticulturae, vol. 160, pp. 29-36, 2013.
[11] N. Goto-Yamamota, A. Azuma, N. Mitani, and S. Kobayashi, “SSR Genotyping of Wild Grap Species and Grap Cultivars of Vitis vinifera and V. vinofera x V. labrusca,” J. Japan. Soc. Hort. Sci, vol. 28(2), pp. 125-130, 2013.
[12] W. A. Al-yousef, W. I. Mohsen, A. F. Al-Tahir, and A. S. R. Abu al-Jadayel, “Molecular characterization of some grape origins published in Syria using molecular indicators SSR,” Jordanian journal of Agricultural sciences, vol. 8(3), 2013.
[13] F. Abdel Rahman, B. Muzher, and F. Hamed, “Molecular characterization for some local and introduced grape cultivars Vitis vinifera .L in Sweida governorate using SSR technique,” Albaath University Magazine, vol. 39(16), pp. 45-65. 2017.
[14] G. Khal, “The Dictionary of Gene Technology: genomics, transcriptomics, proteomics,” Wiley-VCH, Weinheim, pp. 941, 2001.
[15] J. E. Bowers, G. S. Dangl, R. Vignani, and C. P. Meredith, “Isolation and characterization of new polymorphic simple sequence repeat loci in grape (Vitis vinifera L.),” Genome, vol. 39, pp. 628-633, 1996.
[16] K. D. Scott, P. Eggler, G. Seaton, M. Rossetto, E. M. Ablett, L. S. Lee, and R. J. Henry, “Analysis of SSRs derived from grape ESTs,” Theor Appl Genet, vol. 100, pp. 723-726, 2000.
[17] F. J. Rohlf, “Numerical taxonomy and multivariant analysis system. NTSYS version 2.11a.Applied Biostatistics Inc.,” New York, Stoy Book. N.Y. USA, pp. 231, 2002.
[18] S. H. Zeguim Maria, S. Oliveira-Collet, C. A. Manolin, and M. F. Machado, “Differential genetic stability in vineyards of the cultivar „italy‟ (vitis vinifera L.) Cultivated in different regions of southern and southwestern Brazil,” Ciência Téc. Vitiv, vol. 33(1), pp. 66-77, 2018.
[19] S. A. Tamhankar, S. G. Patil, and V. S. Rao, “Assessment of the genetic diversity of some important grape genotypes in India using RAPD markers,” Vitis, vol. 40, pp.157-161, 2001.
[20] P. C. Souza-Leäo, and S. Y. Motoike, “Genetic diversity in table grapes based on RAPD and microsatellite markers,” Pesq. agropec. bras, Brasília, vol. 46(9), pp.1035-1044, 2011.
[21] R. Fatahi, A. Ebadi, N. Bassil, S. A. Mehlenbacher, and Z. Zamani, “Characterization of Iranian grapevine cultivars using microsatellite markers,” Vitis, vol. 42(4), pp.185‑192, 2003.
[22] J. Najafi, L. Alipanah, B. Ghareyazie, S. A. Mohammadi, A. Hagh-Nazari, and P. This, “Genetic diversity of Iranian and some of European grapes revealed by microsatellite markers,” Iran. J. Biotech, vol. 4, pp. 36–44, 2006.